Genetic Diversity and Population Structure in Bread Wheat Germplasm from Turkiye Using iPBS-Retrotransposons-Based Markers

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dc.authoridAras Türkoğlu: 0000-0003-2611-8034en_US
dc.contributor.authorHaliloğlu, Kamil
dc.contributor.authorTürkoğlu, Aras
dc.contributor.authorÖztürk, Ali
dc.contributor.authorNiedbala, Gniewko
dc.contributor.authorNiazian, Mohsen
dc.contributor.authorWojciechowski, Tomasz
dc.contributor.authorPiekutowska, Magdalena
dc.date.accessioned2023-06-01T10:42:46Z
dc.date.available2023-06-01T10:42:46Z
dc.date.issued2023en_US
dc.departmentNEÜ, Ereğli Ziraat Fakültesi, Tarla Bitkileri Bölümüen_US
dc.descriptionMakaleen_US
dc.descriptionWOS:000914297800001en_US
dc.description.abstractThis study investigated the genetic diversity and population structure of 63 genotypes from Turkish bread wheat germplasm using iPBS-retrotransposons primers. The thirty-four iPBS primers produced a total of 1231 polymorphic bands, ranging from 8 (iPBS-2375) to 60 (iPBS-2381) alleles per marker, with an average number of 36.00 alleles. The polymorphism information content (PIC) per marker varied between 0.048 (iPBS 2087) and 0.303 (iPBS 2382), with an average of 0.175. The numbers of effective alleles (ne), genetic diversity of Nei (h), and Shannon's information index (I) value were calculated as 1.157, 0.95, and 0.144, respectively. The greatest genetic distance (0.164) was between Eastern Anatolia Agricultural Research Institute genotypes and cukurova Agricultural Research Institute genotypes. The unweighted pair-group method with arithmetic mean (UPGMA) dendrogram placed the 63 wheat genotypes into three clusters. The percentage of genetic diversity explained by each of the three main coordinates of the basic coordinate analysis was determined to be 44.58, 12.08, and 3.44, respectively. AMOVA (Analysis of Molecular Variance) showed that the variation within populations was 99% and that between populations was 1%. The result of genetic structure analysis suggests that the greatest value of K was calculated as 3. The F-statistic (Fst) value was determined as 0.4005, 0.2374, and 0.3773 in the first to third subpopulations, respectively. Likewise, the expected heterozygosity values (He) were determined as 0.2203, 0.2599, and 0.2155 in the first, second, and third subpopulations, respectively. According to the information obtained in the study, the most genetically distant genotypes were the G1 (Aksel 2000) and G63 (Karasu 90) genotypes. This study provided a deep insight into genetic variations in Turkish bread wheat germplasm using the iPBS-retrotransposons marker system.en_US
dc.identifier.citationHaliloğlu, K., Türkoğlu, A., Öztürk, A., Niedbala, G., Niazian, M., Wojciechowski, T., Piekutowska, M. (2023). Genetic diversity and population structure in bread wheat germplasm from Turkiye using iPBS-retrotransposons-based markers. Agronomy-Basel, 13, 1, 1-15.en_US
dc.identifier.doi10.3390/agronomy13010255en_US
dc.identifier.endpage15en_US
dc.identifier.issn2073-4395en_US
dc.identifier.issue1en_US
dc.identifier.scopusqualityQ1en_US
dc.identifier.startpage1en_US
dc.identifier.urihttp://dx.doi.org/10.3390/agronomy13010255
dc.identifier.urihttps://hdl.handle.net/20.500.12452/9757
dc.identifier.volume13en_US
dc.identifier.wosWOS:000914297800001en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherMDPIen_US
dc.relation.ispartofAgronomy-Baselen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectWheaten_US
dc.subjectGermplasmen_US
dc.subjectGenetic Diversityen_US
dc.subjectEnvironmental Conditionsen_US
dc.subjectGenotypesen_US
dc.subjectInter-primer Binding Siteen_US
dc.subjectVarietiesen_US
dc.subjectPCoAen_US
dc.subjectAMOVAen_US
dc.titleGenetic Diversity and Population Structure in Bread Wheat Germplasm from Turkiye Using iPBS-Retrotransposons-Based Markersen_US
dc.typeArticleen_US

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